More Importing Features
From MedITEX - Wiki
This page contains additional importing features supported by MedITEX.
Please plan enough time for the preparation of the data import as it usually takes several tries to bring all data in required structure.
Contents |
Patient demographics import
You need to prepare an import file which is a list in Excel or CSV format where each line is ONE patient.
Click here to download an example of Patient demographics import file. |
The following elements should be included in this file:
Column name | Column content | |
1. | PATIENT_ID |
Patient ID number (Integer) |
2. | PARTNER_ID |
Partner ID number (Integer) |
3. | DOB | Patient date of birth (Date) |
4. | NAME | Patient name (100 characters) |
5. | FIRST_NAME |
Patient first name (100 characters) |
6. | GENDER | Patient gender (1 character - W/M) |
7. | POSTCODE | Patient address: postal code (50 characters) |
8. | CITY | Patient address: city (50 characters) |
9. | STREET |
Patient address: street (255 characters) |
10. | PHONE | Patient private phone number (50 characters) |
11. | LOCATION (CLINIC) | The clinic where the patient is located (250 characters) |
Please make sure that your current Patient IDs from your existing data are unique.
Required fields are:
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Cryo storage import
It is mandatory to prepare an import file where each line is ONE straw.
Click here to download an example of Cryo storage import file. |
Before importing, it is important to know that:
- The cryo storage dimension must be configured in MedITEX IVF Settings;
- The patient demographics must already be imported into the MedITEX Database;
- Each line must contain the Patient ID, which is the identification for inserting the cryo information for the correct patient. Important is that Patient ID is unique like already mentioned above;
- Type of semen material can be specified in: Native sperm, Prep. Sperm, Tissue, Tissue left, Tissue right, Tissue ambilateral, MESA, MESA left, MESA right, MESA ambilateral, Supernatant, Supernatant left, Supernatant right, Supernatant ambilateral, PESA, TESA, TESE.
The following elements/conditions should be included in the import file:
Column name | Column content | |
1. | PATIENT ID |
Patient ID number (Integer) |
2. | COLLECTION_DATE |
Date of sperm collection/follicle aspiration (Date) |
3. | FREEZING_DATE |
Date of freezing (Date) |
4. | STORAGE_DATE |
Date of storage (Date) |
5. | NO_OOCYTES |
Total number of collected oocytes (Integer) |
6. | IVF_PNs |
Number of PNs after IVF (Integer) |
7. | ICSI_PNs |
Number of PNs after ICSI (Integer) |
8. | IVF_EMBs |
Number of embryos after IVF (Integer) |
9. | ICSI_EMBs |
Number of embryos after ICSI (Integer) |
10. | OVARIAN_TISSUE |
Ovarian tissue cryopreservation (OOC/EMB/PN) (0=No, 1=Yes) |
11. | SEMEN_MATERIAL | Type of semen material specification (100 characters) |
12. | STRAW_ID | Straw ID (50 characters) |
13. | CRYO_TECHNIQUE | Cryo technique used (50 characters) |
14. |
STORAGE_LOCATION |
Storage location description e.g. Container/Tank (128 characters) |
15. | STORAGE_DIM1 |
Storage dimension e.g. Tank level (128 characters) |
16. |
STORAGE_DIM2 |
Storage dimension e.g. Canister level (128 characters) |
17. | STORAGE_DIM3 |
Storage dimension e.g. Goblet level (128 characters) |
18. | POSITION | Straw position (10 characters) |
19. | COLOUR1 | First color defining the straw (10 characters) |
20. | COLOUR2 | Second color defining the straw (10 characters) |
21. | CRYOPRESERVED_BY | Staff responsible of the cryopreservation (100 characters) |
22. | STORED_BY | Staff responsible of the storage (100 characters) |
Required fields are:
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Semen analyses Import
PATIENT_ID | Patient ID number (Integer) |
SAMPLE_ID | Sample ID number (Integer) |
COLLECTION_DATE |
Date of sperm collection (Date) Preferred format: dd.mm.yyyy hh:mm |
PURPOSE |
Purpose of sample collection (128 characters) 0 = Semen analysis, diagnostics 1 = IVF 2 = ICSI 3 = Insemination 4 = Cryopreservation 5 = Control 6 = IMSI 7 = IVM 8 = Fertility preservation 9 = PICSI 11 = Other
A sperm sample can have several collection purposes. If it is the case, the purposes’ ID’s should be separated by a “,”. E.g.: 0,3,8,11 |
FOR_DONATION |
If the sample is marked for donation (Boolean) 0 = No 1 = Yes |
COLLECTION_METHOD |
Method of sample collection (Integer) 0 = Not specified 1 = antegrade ejaculation 2 = retrograde ejaculation 3 = Cryo sperm 4 = MESA 5 = frozen/thawed MESA 6 = PESA 7 = frozen/thawed PESA 8 = TESE 9 = frozen/thawed TESE 10 = Electrostimulation 11 = Spermatocele 12 = Donor 13 = TESA 14 = frozen/thawed TESA 15 = ESA 16 = frozen/thawed ESA 23 = Micro-TESA 24 = Micro-TESE Please note that only one ID referring to sample collection method could be chosen. |
COLLECTION_PLACE |
Place of sample collection (Integer) 1 = At home 2 = At clinic |
COLLECTION_DIFFICULTIES | Sample collection difficulties (200 characters) |
ABS_PERIOD | Abstinence period [days] (Integer) |
ANALYSIS_START |
Analysis start time (Time) Format: hh:mm:ss |
ANALYSED_BY |
Name of the staff performing the sperm sample analysis (113 characters) This will be properly imported once the staff members are inserted in the system. |
APPEARANCE |
Sample appearance (128 characters) 0 = Not specified 1 = Normal 2 = Transparent 3 = Flocculent 4 = Yellowish 5 = Hemospermia 6 = Colloidal particles 7 = Colloidal plaque 8 = Debris
A sperm sample can have several appearances. If it is the case, the appearances’ ID’s should be separated by a “,”. E.g.: 0,3,5,8 |
SMELL |
Smell of the sperm sample (Integer) 1 = Typical 2 = Foul 3 = Other |
VISCOSITY |
Viscosity of the sperm sample (Integer) 0 = Normal 1 = Increased 2 = Lowered |
LIQQUEFACTION_TIME | Sperm sample liquefaction time [minutes] (Integer) |
AGGLUTINATION |
Sperm agglutination (Boolean) 0 = No 1 = Yes |
TREATMENT | |
SCORE | |
NA_VOLUME | |
NA_PH | |
NA_CONCENTRATION | |
NA_VITALITY | |
NA_LEUCOCYTES | |
NA_ROUND_CELLS | |
NA_QUANTIFICATION | |
NA_PEROXIDASE | |
NA_IMMUNOBEAD | |
NA_MAR | |
NA_MAR_IGG | |
NA_MAR_IGA | |
NA_WHO_AB | |
NA_WHO_C | |
NA_WHO_D | |
NA_NORMAL_FORMS | |
NA_HEAD_DEF | |
NA_NECK_MID_DEF | |
NA_TAIL_DEF | |
NA_ERC | |
NA_MULT_DEF | |
NA_TZI | |
AP_VOLUME | |
AP_CONCENTRATION | |
AP_VITALITY | |
AP_LEUCOCYTES | |
AP_ROUND_CELLS | |
AP_QUANTIFICATION | |
AP_ICSI | |
AP_PEROXIDASE | |
AP_IMMUNOBEAD | |
AP_MAR | |
AP_MAR_IGG | |
AP_MAR_IGA | |
AP_WHO_AB | |
AP_WHO_C | |
AP_WHO_D | |
AP_NORMAL_FORMS | |
AP_HEAD_DEF | |
AP_NECK_MID_DEF | |
AP_TAIL_DEF | |
AP_ERC | |
AP_MULT_DEF | |
AP_TZI | |
PREP_DATE | |
PREP_BY | |
PREP_METHOD | |
DNA_FRAG | |
FINDING | |
TIME_COLL_USAGE | |
NO_MOT_SPERM_INSEM | |
NOTE | |
VOL_INSEM | |
24H_MOT |
Insurance Import
It is possible to import insurance companies by providing a spreadsheet with the information described on this section.
An example of this file can be downloaded from the link below. This document contains the insurance information about one insurer.
Click here to download an example of Insurance information import file. |
The structure of this file is described in the table below:
Column name | Column content | |
1. | IN_NAME | Insurer name (50 characters) |
2. | IN_INSURER_NO | Insurer number (30 characters) |
3. | IN_ADDRESS | Insurer address (255 characters) |
4. | IN_EMAIL | Insurer email (50 characters) |
5. | IN_PHONE | Insurer phone (50 characters) |
6. | IN_FAX | Insurer fax (50 characters) |
7. | IN_COUNTRY |
Insurer country (numeric code related to the country) The list of countries and corresponding codes can be downloaded here |
8. | IN_CLINIC_ID_NUMBER | Insurer clinic ID number (defined by the clinic itself) |
9. | IN_IS_INSURANCE | Insurer / Funder (1 = insurer, 0 = funder) |
10. | IN_IS_ECLAIM_BILLING | E-claim billing (1 = yes, 0 = no) |
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